Dept title



Agriculture Fisheries and Conservation Department Hong Kong SAR 2001. Results of Monitoring for H5 Avian Influenza Viruses in Markets. Hong Kong SAR Advisory Council on Food and Environmental Hygiene.

Agriculture Fisheries and Conservation Department Hong Kong SAR. 2006. H5N1-infected birds found in Hong Kong in 2006.

Agriculture Fisheries and Conservation Department Hong Kong SAR. 2007. H5N1-infected birds found in Hong Kong in 2006.

Alexander, D.J. 1987. Avian influenza – historical aspects. In Proceedings 2nd International Symposium on Avian Influenza, pp. 4-13.

Alexander, D.J. 2000. A review of avian influenza in different bird species. Vet. Microbiol. 74(1-2):3-13.

Alexander, D.J. 2007. An overview of the epidemiology of avian influenza. Vaccine 25(30): 5637-5644.

Alexander, D.J., Allan, W.H., Parsons, D.G. & Parsons, G. 1978. The pathogenicity of four avian influenza viruses for fowls, turkeys and ducks. Res.Vet.Sci. 24(2): 242-247.

Alexander, D.J., Murphy, T.J. & McNulty, M.S. 1987. Avian influenza in the British Isles 1981 to 1985. In Proceedings 2nd International Symposium on Avian Influenza pp.70-78. 

Areechokchai, D., Jiraphongsa, C., Laosiritaworn, Y., Hanshaoworakul, W. & O'Reilly M. 2006. Investigation of avian influenza (H5N1) outbreak in humans--Thailand, 2004. Morb.Mortal.Wkly.Rep. 55 (Suppl. 1): 3-6.

Balicer, R.D., Reznikovich, S, Berman, E, Pirak, M, Inbar, A, Pokamunski, S. & Grotto, I. 2007. Multifocal avian influenza (H5N1) outbreak. Emerg Infect Dis . 13(10):1601-1603.

Balkissoon, D., Staines, K., McCauley, J., Wood, J., Young, J., Kaufman, J. & Butter, C. 2007. Low frequency of the Mx allele for viral resistance predates recent intensive selection in domestic chickens. Immunogenetics 59: 687-691.

Bayraktar, R. 2007. Extension Report, February-March 2007. Ministry of Agriculture and Rural Affairs, Turkey Technical Assistance to avian influenza preparedness and response.

Beato, M.S., Toffan A., De Nardi, R., Cristalli, A., Terregino, C., Cattoli, G. & Capua, I. 2007. A conventional, inactivated oil emulsion vaccine suppresses shedding and prevents viral meat colonisation in commercial (Pekin) ducks challenged with HPAI H5N1. Vaccine 25: 4064-4072.

Becker, W.B. 1966. The isolation and classification of Tern virus: influenza A-Tern South Africa—1961 J. Hyg. (Lond.). 64(3): 309-320.

Bender, C., Hall, H., Huang, J., Klimov, A., Cox, N., Hay, A., Gregory, V., Cameron, K., Lim, W. & Subbarao, K. 1999. Characterization of the surface proteins of influenza A (H5N1) viruses isolated from humans in 1997-1998. Virology. 254(1): 115-123.

Bird Life International. 2006. BirdLife Statement on Avian Influenza.

Boon, A.C.M., Sandbulte, M.R., Seiler, P., Webby, R.J., Songserm, T., Guan, Y. & Webster R.G. 2007. Role of terrestrial wild birds in ecology of influenza A virus (H5N1). Emerg. Infect. Dis. 13(11):1720-1724.

Boonyanuwat, K., Thummabutra, S., Sookmanee, N., Vatchavalkhu, V., Siripholvat, V. & Mitsuhashi, T. 2006. Influences of MHC Class II Haplotypes on Avian Influenza Traits. Thai Indigenous Chicken.  J. Poultry Sci. 43:120-125.

Bowes, V.A., Ritchie, S.J., Byrne, S., Sojonky, K., Bidulka, J.J. & Robinson, J.H. 2004. Virus characterization, clinical presentation, and pathology associated with H7N3 avian influenza in British Columbia broiler breeder chickens in 2004. Avian Dis. 48(4):928-34.

Brown, D. 2006. Poultry not wild birds most often carries deadly avian flu to Africa. The Washington Post, 16 Feb 2006

Brown, J.D., Stallknecht, D.E., Beck, J.R., Suarez, D.L. & Swayne, D.E. 2006. Susceptibility of North American ducks and gulls to H5N1 highly pathogenic avian influenza viruses. Emerg.Infect.Dis. 12 (11): 1663-1670.

Brown, J.D., Stallknecht, D.E., Valeika, S & Swayne, D.E. 2007a. Susceptibility of wood ducks to H5N1 highly pathogenic avian influenza virus. J Wildlife Dis. 43 (4): 660-667.

Brown, J.D., Swayne, D.E., Cooper, R.J., Burns, R.E. & Stallknecht, D.E. 2007b. Persistence of H5 and H7 avian influenza viruses in water. Avian Dis. 51: 285-289.

Brugh, M. & Johnson, D.C. 1986. Epidemiology of avian influenza in domestic poultry. In Proceedings 2nd International Symposium on Avian Influenza  pp. 177-185.

Butt, K.M., Smith, G.J., Chen, H., Zhang, L.J., Leung, Y.H., Xu, K.M., Lim, W., Webster, R.G., Yuen, K.Y., Peiris, J.S. & Guan, Y. 2005. Human infection with an avian H9N2 influenza A virus in Hong Kong in 2003 J. Clin. Microbiol. 43(11):5760-5767.

Campitelli, L., Mogavero, E., De Marco, M.A., Delogu, M., Puzelli, S., Frezza, F., Facchini, M., Chiapponi, C., Foni, E., Cordioli, P., Webby, R., Barigazzi, G., Webster, R.G. & Donatelli, I. 2004. Interspecies transmission of an H7N3 influenza virus from wild birds to intensively reared domestic poultry in Italy. Virology 323(1): 24-36.

Capua, I. & Alexander, D.J. 2004. Avian influenza: recent developments 20. Avian Pathol. 33(4): 393-404.

Capua I., Marangon, S., dalla Pozza, M., Terrigino, C. & Cattoli G. 2003. Avian influenza in Italy 1997-2001. Avian Dis. 47 (3 Suppl.): 839-843.

Cardona, C. 2005. Low pathogenicity avian influenza outbreaks in commercial poultry in California. In SL. Knobler, A. Mack, A. Mahmoud, & S.M. Lemon, eds. The threat of pandemic influenza: are we ready? National Academies Press Washington DC. pp243-253

Cauthen, A.N., Swayne, D.E., Schultz-Cherry, S., Perdue, M.L. & Suarez, D.L. 2000. Continued circulation in China of highly pathogenic avian influenza viruses encoding the hemagglutinin gene associated with the 1997 H5N1 outbreak in poultry and humans. J. Virol. 74(14): 6592-6599.

Chen, H., Deng, G., Li, Z., Tian, G., Li, Y., Jiao, P., Zhang, L., Liu, Z., Webster, R.G. & Yu, K. 2004. The evolution of H5N1 influenza viruses in ducks in southern China. Proc. Natl. Acad. Sci. USA. 101(28):10452-10457.

Chen, H., Li, Y., Li, Z., Shi, J., Shinya, K., Deng, G., Qi, Q., Tian, G., Fan, S., Zhao, H., Sun, Y. & Kawaoka, Y. 2006a. Properties and dissemination of H5N1 viruses isolated during an influenza outbreak in migratory waterfowl in western China. J. Virol. 80(12):5976-83.

Chen, H., Li, H., Yang, H., Qiao, C. & Yu, K. 2006b. Swine influenza in China. Dev. Biol. (Basel) 124: 73.

Chen, H., Smith, G.J., Zhang, S.Y., Qin, K., Wang, J., Li, K.S., Webster, R.G., Peiris, J.S. & Guan, Y. 2005. Avian flu: H5N1 virus outbreak in migratory waterfowl. Nature 436: 191-192.

Chen, H., Smith, G.J., Li, K.S., Wang, J., Fan, X.H., Rayner, J.M., Vijaykrishna, D., Zhang, J.X., Zhang, L.J., Guo, C.T., Cheung, C.L., Xu, K.M., Duan, L., Huang, K., Qin, K, Leung, Y.H., Wu, W.L., Lu, H.R., Chen, Y, Xia, N.S., Naipospos, T.S., Yuen, K.Y., Hassan, S.S., Bahri, S., Nguyen, T.D., Webster, R.G., Peiris, J.S. & Guan, Y. 2006c. Establishment of multiple sublineages of H5N1 influenza virus in Asia: implications for pandemic control. Proc. Natl. Acad. Sci. USA. 103(8):2845-50.

Choi, Y.K., Nguyen, T.D., Ozaki, H, Webby, R.J., Puthavathana, P, Buranathal, C, Chaisingh, A, Auewarakul, P, Hanh, N.T., Ma, S.K., Hui, P.Y., Guan, Y, Peiris, J.S. & Webster, R.G.. 2005. Studies of H5N1 influenza virus infection of pigs by using viruses isolated in Vietnam and Thailand in 2004. J.Virol. 79: 10821-10825.

Defra. 2007. Outbreak of highly pathogenic H5N1 avian influenza in Suffolk in January 2007.

Delquiny, T, Edan, M, Nguyen, D.H., Pham, T.K. & Gautier, P. 2004. Evolution and impact of avian influenza epidemic and description of the avian production in Vietnam. Final report to Food and Agriculture Organisation, July 2004.

Desvaux, S., Sorn, S., Holl, D., Chavernac, D., Goutard, F., Thonnat, J., Porphyre, V., Menard, C., Cardinale, E. & Roger, F. 2006. HPAI surveillance programme in Cambodia: results and perspectives. Dev.Biol.(Basel) 124: 211-224.

Duan, L., Campitelli, L., Fan, X.H., Leung, Y.H., Vijaykrishna, D., Zhang, J.X., Donatelli, I., Delogu, M., Li, K.S., Foni, E., Chiapponi, C., Wu, W.L., Kai, H., Webster, R.G., Shortridge, K.F., Peiris, J.S., Smith, G.J., Chen, H. & Guan, Y. 2007. Characterization of Low-Pathogenic H5 Subtype Influenza Viruses from Eurasia: Implications for the Origin of Highly Pathogenic H5N1 Viruses. J Virol 81(14):7529-7539.

Ducatez, M.F., Tarnagda, Z., Tahita, M.C., Sow, A., de Landtsheer, S., Londt, B.Z., Brown, I.H., Osterhaus, D.M., Fouchier, R.A., Ouedraogo, J.B. & Muller, C.P.. 2007. Genetic characterization of HPAI (H5N1) viruses from poultry and wild vultures, Burkina Faso. Emerg.Infect.Dis. 13(4): 611-613.

Earhart, K.C., Boynton, B.R., Saad, M.D. & Monteville, M.R. 2007. The importance of monitoring of H5N1 influenza in Africa. Microbe 2(3) 113.

Ellis, T.M., Bousfield, R.B., Bissett, L.A., Dyrting, K.C., Luk, G.S., Tsim, S.T., Sturm-Ramirez, K., Webster, R.G., Guan, Y., & Peiris, J.S. 2004. Investigation of outbreaks of highly pathogenic H5N1 avian influenza in waterfowl and wild birds in Hong Kong in late 2002. Avian Pathol. 33(5):492-505.

Ellis, T.M., Sims, L.D., Wong, H.K., Wong, C.W., Dyrting, K.C., Chow, K.W., Leung, C. & Peiris, J.S.. Use of avian influenza vaccination in Hong Kong. Dev Biol (Basel). 124:133-43.

Elly, S.S. 2007. HPAI in Indonesia Presentation to Technical Workshop on highly pathogenic avian influenza and H5N1 human influenza Rome, June, 2007.

European Food Saftey Agency. 2006. Opinion of the scientific panel Animal Health and Welfare (AHAW) related with the migratory birds and their possible role in the spread of highly pathogenic avian influenza.

FAO 1998. Village chicken production system in rural Africa – household food security and gender issues, byA.J. Kitalyi. FAO Animal Production and Health Paper 142. Rome.

FAO. 1999. Opportunities for incorporating genetic elements into the management of farm animal diseases: policy issues, by S. Bishop, M. de Jong & D. Gray. Background Study Paper Number 18. Commission on Genetic Resources for Food and Agriculture. Rome.

FAO. 2006. FAOSTAT Statistics Database. Food and Agriculture Organization of theUnited Nations, Rome. Accessed 22 Dec 2006.

Feare, C.J. 2006. Fish farming and the risk of spread of avian influenza. Wild Wings Bird Management and Birdlife International.

Feare, C.J. 2007. The role of wild birds in the spread of HPAI H5N1. Avian Dis. 51(1 suppl.), 440-447.

Gilbert, M., Chaitaweesub, P., Parakamawongsa, T., Premashthira, S., Tiensin, T., Kalpravidh, W., Wagner, H. & Slingenbergh, J. 2006a. Free-grazing ducks and highly pathogenic avian influenza, Thailand. Emerg.Infect.Dis. 12(2): 227-234.

Gilbert, M., Xiao, X., Domenech, J., Lubroth, J., Martin, V. & Slingenbergh, J. 2006b. Anatidae migration in the western Palearctic and spread of highly pathogenic avian influenza H5NI virus. Emerg.Infect.Dis. 12(11): 1650-1656.

Gilbert, M., Xiao, X., Chaitaweesub, P., Kalpravidh, W., Premashthira, S., Boles, S. & Slingenbergh, J. 2007. Avian influenza, domestic ducks and rice agriculture in Thailand. Agriculture, Ecosystems & Environment. 119(3-4): 409-415.

Grain. 2006. Fowl play: the poultry industry’s central role in the bird flu crisis.

Granevitze, Z., Hillel, J., Chen, G.H., Cuc, N.T., Feldman, M., Eding, H. &Weigend, S. 2007. Genetic diversity within chicken populations from different continents and management histories. Anim. Genet. 36(6): 576-583.

Guan, Y., Peiris, M., Kong, K.F., Dyrting, K.C., Ellis, T.M., Sit, T., Zhang, L.J. & Shortridge, K.F.. 2002a. H5N1 influenza viruses isolated from geese in Southeastern China: evidence for genetic reassortment and interspecies transmission to ducks. Virology. 292(1): 16-23.

Guan, Y., Peiris, J.S., Lipatov, A.S., Ellis, T.M., Dyrting, K.C., Krauss, S., Zhang, L.J., Webster, R.G. & Shortridge, K.F.. 2002b. Emergence of multiple genotypes of H5N1 avian influenza viruses in Hong Kong SAR. Proc Natl Acad Sci U S A. 99(13): 8950-8955.

Guan, Y., Poon, L.L., Cheung, C.Y., Ellis, T.M., Lim, W., Lipatov, A.S., Chan, K.H., Sturm-Ramirez, K.M., Cheung, C.L., Leung, Y.H., Yuen, K.Y., Webster, R.G. & Peiris, J.S.. 2004. H5N1 influenza: a protean pandemic threat. Proc.Natl.Acad.Sci.U.S.A. 101 (21): 8156-8161.

Guan, Y., Shortridge, K.F., Krauss, S & Webster, R.G.. 1999. Molecular characterization of H9N2 influenza viruses: were they the donors of the "internal" genes of H5N1 viruses in Hong Kong? Proc.Natl.Acad.Sci.U.S.A 96 (16): 9363-9367.

Halvorson, D.A., Kelleher, C.J.& Senne, D.A. 1985. Epizootiology of avian influenza: effect of season on incidence in sentinel ducks and domestic turkeys in Minnesota. Appl Environ. Microbiol. 49(4): 914-9.

Hillel, J., Groenen, M.A., Tixier-Boichard, M., Korol, A.B., David, L., Kirzhner, V.M., Burke, T., Barre-Dirie, A., Crooijmans, R.P., Elo, K., Feldman, M.W., Freidlin, P.J., Maki-Tanila, A., Oortwijn, M., Thomson, P., Vignal, A., Wimmers, K. & Weigend, S. 2003. Biodiversity of 52 chicken populations assessed by microsatellite typing of DNA pools. Genet. Sel. Evol. 35(5): 533-557.

Hulse-Post, D.J., Sturm-Ramirez, K.M., Humberd, J., Seiler, P., Govorkova, E.A., Krauss, S., Scholtissek, C., Puthavathana, P., Buranathai, C., Nguyen, T.D., Long, H.T., Naipospos, T.S., Chen, H., Ellis, T.M., Guan, Y., Peiris, J.S. & Webster, RG. 2005. Role of domestic ducks in the propagation and biological evolution of highly pathogenic H5N1 influenza viruses in Asia. Proc.Natl.Acad.Sci.U.S.A 102(30): 10682-10687.

Humberd, J., Boyd, K. & Webster, R.G. 2007. Emergence of influenza A virus variants after prolonged shedding from pheasants. J Virol. 81(8): 4044-4051.

Irza, V.N. 2006. Avian influenza in Russia. Current situation and control strategiesPresentation to the Twelfth Annual Meeting of the Avian Influenza and Newcastle Disease Community Reference Laboratories.

Ito, T., Goto, H., Yamamoto, E., Tanaka, H., Takeuchi, M., Kuwayama, M., Kawaoka, Y. & Otsuki, K. (2001) Generation of a highly pathogenic avian influenza A virus from an avirulent field isolate by passaging in chickens. J.Virol. 75 (9): 4439-4443.

Johnston, J. 1990. Health and productivity of village poultry in Southeast Asia. Economic impact of developing techniques to vaccinate birds orally against Newcastle disease. ACIAR Working Paper No. 31. Canberra, Australia.

Kandun, I.N., Wibisono, H., Sedyaningsih, E.R., Yusharmen, Hadisoedarsuno, W., Purba, W., Santoso, H., Septiawati, C., Tresnaningsih, E., Heriyanto, B., Yuwono, D., Harun, S., Soeroso, S., Giriputra, S., Blair, P.J., Jeremijenko, A., Kosasih, H., Putnam, S.D., Samaan, G., Silitonga, M., Chan, K.H., Poon, L.L., Lim, W., Klimov, A., Lindstrom, S., Guan, Y., Donis, R., Katz, J., Cox, N., Peiris, M. & Uyeki, T.M. 2006. Three Indonesian clusters of H5N1 virus infection in 2005. N.Engl.J.Med. 355 (21): 2186-2194.

Kawaoka, Y., Nestorowicz, A., Alexander, D.J. & Webster, R.G. 1987. Molecular analyses of the hemagglutinin genes of H5 influenza viruses: origin of a virulent turkey strain. Virology 158(1): 218-227.

Kilpatrick, A.M., Chmura, A.A., Gibbons, D.W., Fleischer, R.C., Marra, P.P. & Daszak, P. 2006. Predicting the global spread of H5N1 avian influenza. Proc. Natl.Acad.Sci.U.S.A 103(51): 19368-19373.

Kishida, N., Sakoda, Y., Eto, M., Sunaga, Y. & Kida, H. 2004. Co-infection of Staphylococcus aureus or Haemophilus paragallinarum exacerbates H9N2 influenza A virus infection in chickens. Arch. Virol. 149(11):2095-2104.

Klopfleisch, R., Werner, O., Mundt, E., Harder, T. & Teifke, J.P. 2006. Neurotropism of highly pathogenic avian influenza virus A/chicken/Indonesia/2003 (H5N1) in experimentally infected pigeons (Columbia livia f. domestica). Vet.Pathol. 43(4): 463-470.

Kobasa, D., Wells, K. & Kawaoka, Y. 2001. Amino acids responsible for the absolute sialidase activity of influenza A virus neuraminidase: relationship to growth in the duck intestine. J Virol 75(23): 11773-11780.

Ko, J.H., Jin, H.K., Asano, A., Takada, A., Ninomiya, A., Kida, H., Hokiyama, H., Ohara, M., Tsuzuki, M., Nishibori, M., Mizutani, M. & Watanabe, T. 2002. Polymorphisms and the differential antiviral activity of the chicken Mx gene. Genome Res. 12(4): 595-601.

Koenen, M.E., Boonstra-Blom, A.G. & Jeurissen, S.H.M. 2002. Immunological differences between layer- and broiler-type chickens. Vet. Immunol. Immunopathol. 89 (1-2): 47-56.

Kou, Z., Lei, F.M., Yu, J., Fan, Z.J., Yin, Z.H., Jia, C.X., Xiong, K.J., Sun, Y.H., Zhang, X.W., Wu, X.M., Gao, X.B. & Li, T.X.. 2005. New genotype of avian influenza H5N1 viruses isolated from tree sparrows in China. J Virol. 79(24): 15460-15466.

Lee, C.W., Senne, D.A., Linares, J.A., Woolcock, P.R., Stallknecht, D.E., Spackman, E., Swayne, D.E. & Suarez, D.L. 2005. H5N2 avian influenza outbreak in Texas in 2004: the first highly pathogenic strain in the United States in 20 years? J Virol. 79(17): 11412-11421.

Lee, Y.J., Choi, Y.K., Kim, Y.J., Song, M.S., Jeong, O.M., Lee E.K., Jeon,W.J., Jeong, W., Joh, S.J., Choi, K.S., Her, M., Kim, M.C., Kim, A., Kim, M.J., Lee, E.H., Oh, T.G., Moon, H.J.,  Yoo, D.W.,  Kim, J.H., Sung, M.H., Poo, H.,  Kwon, J.H. & Kim, C.J. (2008). Highly pathogenic avian influenza virus (H5N1) in domestic poultry and relationship with migratory birds, South Korea. Emerg. Infect. Dis. 14 (3): 487-490.

Li, K.S., Guan, Y., Wang, J., Smith, G.J., Xu, K.M., Duan, L., Rahardjo, A.P., Puthavathana, P., Buranathai, C., Nguyen, T.D., Estoepangestie, A.T., Chaisingh, A., Auewarakul, P., Long, H.T., Hanh, N.T., Webby, R.J., Poon, L.L., Chen, H., Shortridge, K.F., Yuen, K.Y., Webster, R.G. & Peiris, J.S. 2004a. Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia. Nature. 430(6996):209-213.

Li, H.Y., Yu K.Z., Yang H. L., Xin, X.G., Chen, J.Y., Zhao, P., Bi, Y.Z. & Chen H.L. 2004b. Isolation and characterisisation of H5N1 and H9N2 influenza viruses from pigs in China. Chinese J. Vet Prev. Med. 26(1) 1-6.

Liu, M., Guan, Y., Peiris, M., He, S., Webby, R.J., Perez, D., Webster, R.G. 2003. The quest of influenza A viruses for new hosts. Avian Dis. 47 (3 suppl.): 849-856.

Liu, Y., Zhou, J., Yang, H., Yao, W., Bu, W., Yang, B., Song, W., Meng, Y., Lin, J., Han, C., Zhu, J., Ma, Z., Zhao, J. & Wang, X. 2007. Susceptibility and transmissibility of pigeons to Asian-lineage highly pathogenic avian influenza virus subtype H5N1. Avian Pathol. 36 (6): 461-465.

Londt, B.Z., Banks, J. & Alexander, D.J. 2007. Highly pathogenic avian influenza viruses with low virulence for chickens in in vivo tests. Avian Pathol. 36 (5): 347-350.

Lvov, D.K., Schelkanov, M.I.U., Deriabin, P.G., Grebennikova, T.V., Prilipov, A.G., Nepoklonov, Y.A., Onishchenko, G.G., Vlasov, N.A., Aliper, T.I., Zaberezhnyi, A.D., Kireyev, Y.D., Krasheninnikov. O.P., Kiryukhin, S.T., Burtseva, Y. I. & Slepushkin, A.N. 2006. Isolation of influenza A/H5N1 virus strains from poultry and wild birds in west Siberia during epizooty (July 2005) and their depositing to the state collection of viruses (August 2005). [In Russian].Vopr. Virusol. 51:11-14.

Maines, T.R., Lu, X.H., Erb, S.M., Edwards, L., Guarner, J., Greer, P.W., Nguyen, D.C., Szretter, K.J., Chen, L.M., Thawatsupha, P., Chittaganpitch, M., Waicharoen, S., Nguyen, D.T., Nguyen, T., Nguyen, H.H., Kim, J.H., Hoang, L.T., Kang, C., Phuong, L.S., Lim, W., Zaki, S., Donis, R.O., Cox, N.J., Katz, J.M. & Tumpey, T.M. 2005. Avian influenza (H5N1) viruses isolated from humans in Asia in 2004 exhibit increased virulence in mammals. J Virol. 79(18): 11788-11800.

Makarova, N.V., Ozaki, H., Kida, H., Webster, R.G. & Perez, D.R. 2003. Replication and transmission of influenza viruses in Japanese quail. Virology 310(1): 8-15.

Marangon, S., Capua, I., Pozza, G. & Santucci, U. 2004. Field experiences in the control of avian influenza outbreaks in densely populated poultry areas. Dev Biol (Basel). 119:155-64.

Mase, M., Kim, J.H., Lee, Y.J., Tsukamoto, K., Imada, T., Imai, K. & Yamaguchi, S. 2005. Genetic comparison of H5N1 influenza A viruses isolated from chickens in Japan and Korea. Microbiol.Immunol. 49(9): 871-874.

Matrosovich, M., Zhou, N., Kawaoka, Y. & Webster, R. 1999. The surface glycoproteins of H5 influenza viruses isolated from humans, chickens, and wild aquatic birds have distinguishable properties. J.Virol. 73(2): 1146-1155.

Middleton, D., Bingham, J., Selleck, P., Lowther, S., Gleeson, L., Lehrbach, P., Robinson, S., Rodenberg, J., Kumar, M. & Andrew, M. 2007. Efficacy of inactivated vaccines against H5N1 avian influenza infection in ducks. Virology 359(1): 66-71.

Minta, Z., Smietanka K., Domanska-Blicharz, K., Tomczyk, G., & Wijaszka, T. 2006. HPAI H5N1 infection of a mute swan flock in the city of Torun in Poland. In Joint Twelfth Annual Meetings of the National Laboratories for Newcastle Disease and Avian Influenza of European Union Member States 2006.

Mounts, A.W., Kwong, H., Izurieta, H.S., Ho, Y., Au, T., Lee, M., Buxton, B.C., Williams, S.W., Mak, K.H., Katz, J.M., Thompson, W.W., Cox, N.J. & Fukuda, K. 1999. Case-control study of risk factors for avian influenza A (H5N1) disease, Hong Kong, 1997. J.Infect.Dis. 180 (2): 505-508.

Mukhtar, M.M., Rasool, S.T., Song, D., Zhu, C., Hao, Q., Zhu, Y. & Wu, J. 2007. Origin of highly pathogenic H5N1 avian influenza virus in China and genetic characterization of donor and recipient viruses. J Gen.Virol. 88 (11): 3094-3099.

Munster, V.J., Wallensten, A, Baas, C, Rimmelzwaan, G.F., Schutten, M, Olsen, B, Osterhaus, A.D. & Fouchier, R.A. 2005. Mallards and highly pathogenic avian influenza ancestral viruses, northern Europe. Emerg.Infect.Dis. 11 (10): 1545-1551.

Nestorowicz, A., Kawaoka, Y., Bean, W.J. & Webster, R.G. 1987. Molecular analysis of the hemagglutinin genes of Australian H7N7 influenza viruses: role of passerine birds in maintenance or transmission? Virology 160 (2): 411-418.

Nguyen, D.C., Uyeki, T.M., Jadhao, S., Maines, T., Shaw, M., Matsuoka, Y., Smith, C., Rowe, T., Lu, X., Hall, H., Xu, X., Balish, A., Klimov, A., Tumpey, T.M., Swayne, D.E., Huynh, L.P., Nghiem, H.K., Nguyen, H.H., Hoang, L.T., Cox, N.J. & Katz, J.M. 2005. Isolation and characterization of avian influenza viruses, including highly pathogenic H5N1, from poultry in live-bird markets in Hanoi, Vietnam, in 2001. J.Virol. 79(7): 4201-4212.

Nishiguchi, A., Yamamoto, T., Tsutsui, T., Sugizaki, T., Mase, M., Tsukamoto, K., Ito, T. & Terakado, N. 2005. Control of an outbreak of highly pathogenic avian influenza, caused by the virus sub-type H5N1, in Japan in 2004. Rev Sci Tech. 24(3): 933-944.

OIE. 2006. Update on highly pathogenic avian influenza in animals. World Organisation for Animal Health, Paris.

OIE. 2006b. Disease Information 19:4. World Organisation for Animal Health, Paris.

O’Neill, G. 2007. Fighting bird flu with RNAi Australian Life Scientist.

Ortiz, J.R., Katz, M.A., Mahmoud, M.N., Ahmed, S., Bawa, S.I., Farnon, E.C., Sarki, M.B., Nasidi, A., Ado, M.S., Yahaya, A.H., Joannis, T.M., Akpan, R.S., Vertefeuille, J., Achenbach, J., Breiman, R.F., Katz, J.M., Uyeki, T.M., Wali, S.S. 2007. Lack of evidence of avian-to-human transmission of avian influenza A (H5N1) virus among poultry workers, Kano, Nigeria, 2006. J. Infect.Dis. 196 (11): 1685-1691.

Pantin-Jackwood, M.J.& Swayne, D.E. 2007. Pathobiology of Asian highly pathogenic avian influenza H5N1 virus infections in ducks. Avian Dis. 51 (1 suppl.): 250-259.

Pasick, J., Handel, K., Robinson, J., Copps, J., Ridd, D., Hills, K., Kehler, H., Cottam-Birt, C., Neufeld, J., Berhane, Y. & Czub, S. 2005. Intersegmental recombination between the haemagglutinin and matrix genes was responsible for the emergence of a highly pathogenic H7N3 avian influenza virus in British Columbia. J. Gen. Virol.. 86 (3): 727-731.

Peiris, J.S., Guan, Y., Markwell, D., Ghose, P., Wester, R.G. & Shortridge, K.F. 2001. Cocirculation of avian H9N2 and contemporary “human” H3N2 influenza A viruses in pigs in southern China: potential for genetic reassortment. J. Virol. 75(20): 9679-9686.

Peiris, J.S.M., de Jong, M. & Guan, Y. 2007. Avian Influenza (H5N1) A threat to human health. Clin. Microbiol. Rev. 20 (2):243-267.

Perkins, L.E. & Swayne, D.E. 2001. Pathobiology of A/chicken/Hong Kong/220/97 (H5N1) avian influenza virus in seven gallinaceous species. Vet.Pathol. 38(2): 149-164.

Perkins, L.E. & Swayne, D.E. 2002. Pathogenicity of a Hong Kong-origin H5N1 highly pathogenic avian influenza virus for emus, geese, ducks, and pigeons. Avian Dis. 46 (1): 53-63.

Phuong, D.Q., Dung, N.T.& Christensen, J.P. 2006. H5 Avian influenza in rural poultry of Thai-Binh Province Vietnam. Dev Biol (Basel) 124:234.

Pitzer, V.E., Olsen, S.J., Bergstrom, C.T., Dowell, S.F., Lipsitch, M. 2007. Little evidence for genetic susceptibility to influenza A (H5N1) from family clustering data. Emerg Infect Dis 13 (7): 1074-1076.

Power, C. 2005. The Source and Means of Spread of the Avian Influenza Virus in the LowerFraserValley of British Columbia During an Outbreak in the Winter of 2004.

ProMED-mail. Avian influenza - Asia (23): Migratory birds. ProMED-mail 2005; 7 September: 20050907.2657, available at, Accessed 10 July 2006.

Promkuntod, N., Antarasena, C, Prommuang, P & Prommuang, P. 2006. Isolation of avian influenza virus A subtype H5N1 from internal contents (albumen and allantoic fluid) of Japanese quail (Coturnix coturnix japonica) eggs and oviduct during a natural outbreak. Ann.N.Y.Acad.Sci. 1081: 171-173.

Rimmelzwaan, G.F., van Riel, D., Baars, M., Bestebroer, T.M., van Amerongen, G., Fouchier, R.A., Osterhaus A.D. & Kuiken, T. 2006. Influenza A virus (H5N1) infection in cats causes systemic disease with potential novel routes of virus spread within and between hosts. Am.J.Pathol. 168 (1): 176-183.

Roberton, S.I., Bell, D.J., Smith, G.J., Nicholls, J.M., Chan, K.H., Nguyen, D.T., Tran, P.Q., Streicher, U., Poon, L.L., Chen, H., Horby, P., Guardo, M., Guan, Y., Peiris, J.S. 2006. Avian influenza H5N1 in viverrids: implications for wildlife health and conservation. Proc.Biol. Sci. 273(1595): 1729-1732.

Sawabe, K., Hoshino, K., Isawa, H., Sasaki, T., Hayashi, T., Tsuda, Y., Kurahashi, H., Tanabayashi, K., Hotta, A., Saito, T., Yamada, A., Kobayashi, M. 2006. Detection and isolation of highly pathogenic H5N1 avian influenza A viruses from blow flies collected in the vicinity of an infected poultry farm in Kyoto, Japan, 2004 Am.J.Trop.Med.Hyg. 75 (2): 327-332.

Selleck, P.W., Arzey, G., Kirkland, P.D., Reece, R.L., Gould, A.R., Daniels, P.W. & Westbury H.A. 2003. An outbreak of highly pathogenic avian influenza in 1997 caused by an H7N4 virus. Avian Dis. 47(3 suppl): 806-811.

Shortridge, K.F. 1992. Pandemic influenza: a zoonosis? Semin.Respir.Infect. 7 (1): 11-25.

Shortridge, K.F. 1999. Poultry and the influenza H5N1 outbreak in Hong Kong, 1997: abridged chronology and virus isolation. Vaccine. 17 (Suppl 1): S26-9

Shortridge, K.F., Zhou, N.N., Guan, Y, Gao, P., Ito, T., Kawaoka, Y., Kodihalli, S., Krauss, S., Markwell, D., Murti, K.G., Norwood, M., Senne, D., Sims, L., Takada, A. & Webster, R.G. 1998. Characterization of avian H5N1 influenza viruses from poultry in Hong Kong. Virology 252 (2): 331-342.

Sims, L.D. 2007. Lessons learned from Asian H5N1 outbreak control. Avian Dis. 51 (1 suppl.): 174-181.

Sims, L.D., Domenech, J., Benigno, C., Kahn, S., Kamata, A., Lubroth, J., Martin, V. & Roeder, P. 2005. Origin and evolution of highly pathogenic H5N1 avian influenza in Asia. Vet. Rec. 157 (6): 159-164.

Sims, L.D., Ellis, T.M., Liu, K.K., Dyrting, K., Wong, H., Peiris, M., Guan, Y. & Shortridge, K.F. 2003.  Avian influenza in Hong Kong 1997-2002. Avian Diseases 47 (suppl. 3): 832-838.

Sipress, A. 2006. Vietnam a gateway for bird flu. The Washington Post. 30 July 2006.

Smith, G.J., Fan, X.H., Wang, J, Li, K.S., Qin, K, Zhang, J.X., Vijaykrishna, D., Cheung, C.L., Huang, K., Rayner, J.M., Peiris, J.S., Chen, H., Webster, R.G. & Guan, Y. 2006a Emergence and predominance of an H5N1 influenza variant in China. Proc.Natl.Acad.Sci.U.S.A. 103 (45): 16936-16941.

Smith, G.J., Naipospos, T.S., Nguyen, T.D., de Jong, M.D., Vijaykrishna, D., Usman, T.B., Hassan, S.S., Nguyen, T.V., Dao, T.V., Bui, N.A., Leung, Y.H., Cheung, C.L., Rayner, J.M., Zhang, J.X., Zhang, L.J., Poon, L.L., Li, K.S., Nguyen, V.C., Hien, T.T., Farrar, J., Webster, R.G., Chen, H., Peiris, J.S. & Guan, Y. 2006b. Evolution and adaptation of H5N1 influenza virus in avian and human hosts in Indonesia and Vietnam. Virology. 350(2):258-268.

Songserm, T., Jam-on, R., Sae-Heng, N., Meemak, N., Hulse-Post, D.J., Sturm-Ramirez, K.M. & Webster, R.G. 2006. Domestic ducks and H5N1 influenza epidemic, Thailand. Emerg. Infect. Dis. 12(4):575-81.

Songserm, T., Jam-on, R., Sae-Heng, N. & Meemak, N. 2006. Survival and stability of HPAI H5N1 in different environments and susceptibility to disinfectants. Dev Biol (Basel) 124:254.

Stallknecht, D.E., Kearney, M.T., Shane, S.M. & Zwank, P.J. 1990a. Effects of pH, temperature, and salinity on persistence of avian influenza viruses in water. Avian Dis. 34 (2): 412-418.

Stallknecht, D.E., Shane, S.M., Zwank, P.J., Senne, D.A. & Kearney, M.T. 1990b. Avian influenza viruses from migratory and resident ducks of coastal Louisiana. Avian Dis. 34 (2): 398-405.

Stallknecht, D.E. 1997. Ecology and Epidemiology of Avian Influenza Viruses in Wild Bird Populations: Waterfowl, Shorebirds, Pelicans, Cormorants, etc. In: Proceedings 4th International Symposium on Avian Influenza, U.S. Animal Health Association, Athens, GA. pp. 61-69.

Steensels, M., van Borm, S., Lambrecht, B, De, V.J., Le, Gros, F.X., Bublot, M & van den Berg, T. 2007. Efficacy of an inactivated and a fowlpox-vectored vaccine in Muscovy ducks against an Asian H5N1 highly pathogenic avian influenza viral challenge. Avian Dis. 51 (1 suppl.): 325-331.

Stegeman, A., Bouma, A., Elbers, A.R., de Jong, M.C., Nodelijk, G., de Klerk, F., Koch, G., & van Boven, M. 2004. Avian influenza A virus (H7N7) epidemic in The Netherlands in 2003: course of the epidemic and effectiveness of control measures. J Infect Dis. 190(12): 2088-95.

Sturm-Ramirez, K.M., Ellis, T., Bousfield, B., Bissett, L., Dyrting, K., Rehg, J.E., Poon, L., Guan, Y., Peiris, M. & Webster, R.G. 2004. Reemerging H5N1 influenza viruses in Hong Kong in 2002 are highly pathogenic to ducks. J.Virol. 78 (9): 4892-4901.

Sturm-Ramirez, K.M., Hulse-Post D.J., Govorkova, E.A., Humberd, J., Seiler, P., Puthavathana, P., Buranathai, C., Nguyen, T.D., Chaisingh, A., Long, H.T., Naipospos, T.S., Chen, H., Ellis, T.M., Guan, Y., Peiris, J.S. & Webster, R.G. 2005. Are ducks contributing to the endemicity of highly pathogenic H5N1 influenza virus in Asia? J Virol. 79(17):11269-79.

Suarez, D.L. & Senne, D.A. 2000. Sequence analysis of related low-pathogenic and highly pathogenic H5N2 avian influenza isolates from United States live-bird markets and poultry farms from 1983 to 1989. Avian Dis. 44 (2): 356-364.

Suarez, D.L., Senne, D.A., Banks, J., Brown, I.H., Essen, S.C., Lee, C.W., Manvell, R.J., Mathieu-Benson, C., Moreno, V., Pedersen, J.C., Panigrahy, B., Rojas, H., Spackman, E. & Alexander, D.J. 2004. Recombination resulting in virulence shift in avian influenza outbreak, Chile. Emerg. Infect. Dis. 10(4):693-9.

Swayne, D.E. & Pantin-Jackwood, M. 2006. Pathogenicity of avian influenza viruses in poultry. Dev.Biol.(Basel) 124: 61-67.

Swayne, D.E. & Suarez, D.L. 2000. Highly pathogenic avian influenza. Rev.Sci.Tech. 19 (2): 463-482.

Taubenberger, J.K., Reid, A.H., Lourens, R.M., Wang, R., Jin, G. & Fanning, T.G. 2005. Characterization of the 1918 influenza virus polymerase genes. Nature. 437(7060): 889-893.

Thiry, E., Zicola, A., Addie, D., Egberink, H., Hartmann, K., Lutz, H., Poulet, H. & Horzinek, M.C. 2007. Highly pathogenic avian influenza H5N1 virus in cats and other carnivores. Vet. Microbiol. 122(1-2):25-31.

Tian, G., Zhang, S., Li, Y., Bu, Z., Liu, P., Zhou, J., Li, C., Shi, J., Yu, K. & Chen, H. 2005. Protective efficacy in chickens, geese and ducks of an H5N1-inactivated vaccine developed by reverse genetics. Virology 341 (1): 153-162.

Tiensin, T., Chaitaweesub, P., Songserm, T., Chaisingh, A., Hoonsuwan, W., Buranathai, C., Parakamawongsa, T., Premashthira, S., Amonsin, A., Gilbert, M., Nielen, M. & Stegeman, A. 2005. Highly pathogenic avian influenza H5N1, Thailand, 2004 Emerg Infect Dis. 11(11):1664-1672.

Tiensin, T., Nielen, M., Songserm, T., Kalpravidh, W., Chaitaweesub, P., Amonsin, A., Chotiprasatintara, S., Chaisingh, A., Damrongwatanapokin, S., Wongkasemjit, S., Antarasena, C., Songkitti, V., Chanachai, K., Thanapongtham, W. & Stegeman, J.A. 2007a. Geographic and temporal distribution of highly pathogenic avian influenza A virus (H5N1) in Thailand, 2004-2005: an overview. Avian Dis. 51 (1 suppl.): 182-188.

Tiensin, T., Nielen, M., Vernooij, H., Songserm, T., Kalpravidh, W., Chotiprasatintara, S., Chaisingh, A., Wongkasemjit, S., Chanachai, K., Thanapongtham, W., Srisuvan, T. & Stegeman, A. 2007b. Transmission of the highly pathogenic avian influenza virus H5N1 within flocks during the 2004 epidemic in Thailand. J Infect.Dis. 196 (11): 1679-1684.

Tracey, J.P., Woods, R., Roshier, D., West, P. & Saunders, G.R. 2004. The role of wild birds in the transmission of avian influenza in Australia: an ecological study. Emu 104:109-124.

Truscott, J., Garske, T., Chis-Ster, I., Guitian, J., Pfeiffer, D., Snow, L., Wilesmith, J., Ferguson, N.M. & Ghani, A.C. 2007. Control of a highly pathogenic H5N1 avian influenza outbreak in the GB poultry flock. Proc Biol.Sci. 274, 2287-2295.

Tsukamoto, K., Imada, T., Tanimura, N., Okamatsu, M., Mase, M., Mizuhara, T., Swayne, D. & Yamaguchi, S.. 2007. Impact of different husbandry conditions on contact and airborne transmission of H5N1 highly pathogenic avian influenza virus to chickens. Avian Dis. 51, 129-132.

Tumpey, T.M., Suarez, D.L., Perkins, L.E., Senne, D.A., Lee, J.G., Lee, Y.J., Mo, I.P., Sung, H.W. & Swayne, D.E. 2002. Characterization of a highly pathogenic H5N1 avian influenza A virus isolated from duck meat. J Virol. 76 (12):6344-55.

Turner, A.J. 1981. Avian influenza in Australia. In: Proceedings of the 1st International Symposium on Avian Influenza, p 19.

Villarreal, C.L. 2006. Control and eradication strategies of avian influenza in Mexico. Dev.Biol.(Basel) 124: 125-126

Webster, R.G. & Govorkova, E.A. 2006. H5N1 influenza--continuing evolution and spread. N.Engl.J.Med. 355 (21): 2174-2177.

Webster, R.G. & Hulse, D. 2004. Microbial adaptation and change: avian influenza  Rev. Sci. Tech 23 (2): 453-65.

Wee, S.H., Park, C.K., Nam, H.M., Kim, C.H., Yoon, H, Kim, S.J., Lee, E.S., Lee, B.Y., Kim, J.H., Lee, J.H. & Kim, C.S. 2006. Outbreaks of highly pathogenic avian influenza (H5N1) in the Republic of Korea in 2003/04.Vet.Rec. 158(10): 341-344.

Werner, O, Starick, E, Teifke, J, Klopfleisch, R, Prajitno, T.Y., Beer, M, Hoffmann, B & Harder, T.C. 2007. Minute excretion of highly pathogenic avian influenza virus A/chicken/Indonesia/2003 (H5N1) from experimentally infected domestic pigeons (Columbia livia) and lack of transmission to sentinel chickens. J Gen.Virol. 88 (11): 3089-3093.

Westbury, H.A. 1997. History of highly pathogenic avian influenza in Australia. In: Proceedings of 4th International Symposium on Avian Influenza, pp22-30.

Wilkinson, L. & Waterson, A.P. 1975. The development of the virus concept as reflected in corpora of studies on individual pathogens. 2. The agent of fowl plague--a model virus. Med Hist. 19:52–72.

Williams, A. 2005. Tracking bird flu. New Scientist: 2528 24.

World Health Organization. 2005. Evolution of H5N1 avian influenza viruses in Asia. Emerg. Infect.Dis. 11 (10):1515-1521.

World Health Organization. 2006. Antigenic and genetic characteristics of H5N1 viruses and candidate H5N1 vaccine viruses developed for potential use as pre-pandemic vaccines.

World Health Organization. 2006. Avian influenza – H5N1 infection found in a stone marten in Germany.

World Health Organisation. 2007. Cumulative number of confirmed human cases of avian influenza A/(H5N1). 

World Health Organization, Office International des Epizooties & Food and Agriculture Organization, H5N1 Evolution Working Group. 2007. Towards a unified nomenclature system for the highly pathogenic H5N1 avian influenza viruses Poster presentation at Options for Control of Influenza VI.  June 17-23 2007, Toronto Canada.

Xu, X., Subbarao, Cox, N.J. & Guo, Y. 1999. Genetic characterization of the pathogenic influenza A/Goose/Guangdong/1/96 (H5N1) virus: similarity of its hemagglutinin gene to those of H5N1 viruses from the 1997 outbreaks in Hong Kong. Virology 261(1): 15-19.

Yamamoto, Y., Nakamura, K., Kitagawa, K., Ikenaga, N., Yamada, M., Mase, M. & Narita, M. 2007. Pathogenesis in call ducks inoculated intranasally with H5N1 highly pathogenic avian influenza virus and transmission by oral inoculation of infective feathers from an infected call duck. Avian Dis 51 (3): 744-749.

Yang, Y., Halloran, M.E., Sugimoto, J.D., Longini, I.M. 2007. Detecting human-to-human transmission of avian influenza A (H5N1). Emerg Infect Dis. 13 (9):1348–53.

Young, L. 2007. Avian influenza and wild birds: update from Hong Proceedings of the Aviemore Workshop on Practical Lessons Learned 26-28 June 2007.

Zekarias, B, ter Huurne, A.A., Landman, W.J., Rebel, J.M., Pol, J.M, Gruys, E. 2002. Immunological basis of differences in disease resistance in the chicken. Vet.Res. 33 (2): 109-125.

Zhou, J.Y., Shen, H.G., Chen, H.X., Tong, G.Z., Liao, M, Yang, H.C., Liu, J.X. 2006. Characterization of a highly pathogenic H5N1 influenza virus derived from bar-headed geese in China. J.Gen.Virol. 87, 1823-1833.

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