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Book (stand-alone)Monitoring and surveillance of antimicrobial resistance in bacterial pathogens from aquaculture
Regional Guidelines for the Monitoring and Surveillance of Antimicrobial Resistance, Use and Residues in Food and Agriculture – Volume 3
2023Also available in:
No results found.The guidelines provide a regional overview of antimicrobial resistance (AMR) surveillance in aquaculture, including the importance of harmonizing methodologies across the region (Chapter 1). The guidelines also cover approaches to the design of AMR surveillance in aquaculture, from identifying the target population to sampling considerations (Chapter 2). Sample consideration and transport are described in detail, following standing methodologies for disease surveillance in aquaculture (Chapter 3). The laboratory methods are described, from general principles to specific methodologies (Chapter 4). Finally, the guidelines also describe AMR data management including collection, storage, analysis, and presentation (Chapter 5). While Volume 3 provides guidance for carrying out AMR monitoring and surveillance in aquaculture, the other areas in the AMR surveillance framework are covered in the respective volumes of this regional guideline series: Volume 1 (Monitoring and surveillance of antimicrobial resistance in bacteria from healthy food animals intended for consumption), Volume 2 (Monitoring and surveillance in animal pathogens recovered from diseased livestock); Volume 4 (Monitoring bacterial resistance in the animal environment) that will focus on monitoring AMR in bacteria from agriculture settings (such as manure and slurry in livestock farms and aquatic environments), Volume 5 (Monitoring antimicrobial usage in animals at the farm level) and Volume 6 (Monitoring antimicrobial residues in food). Experts from FAO, the Singapore Food Agency and the Singapore National Parks Board led the writing of this volume. -
Book (series)Joint FAO/WHO Expert Meeting in collaboration with OIE on Foodborne Antimicrobial Resistance: Role of the Environment, Crops and Biocides
Meeting report
2019Also available in:
No results found.Responding to the request from the 39th Session Codex Alimentarius Commission (CAC) and the ad hoc Codex Intergovernmental Task Force on Antimicrobial Resistance (TFAMR) for information about antimimcrobial resistance, this report provides scientific advice on the subject derived from a joint “FAO/WHO expert meeting on foodborne antimicrobial resistance: role of environment, crops and biocides” on 11-15 June 2018 in Rome, Italy. There is clear scientific evidence that foods of plant origin may serve as a vehicle of foodborne exposure to antimicrobial-resistant bacteria. Aquaculture products can also carry bacteria that are resistant to medically important antimicrobials. As such, concerted efforts should be made to mitigate their contamination at all stages of the food chain, from production to consumption. Notably, antimicrobials should only be used in crop production according to label guidelines in the context of integrated pest management strategies. To improve food safety, best management practices should be adhered to with respect to the use of human and animal wastes for soil amendment purposes and for the prevention of environmental contamination where aquatic animals are raised for food. Foods of plant and aquatic animal origin food incorporated in to integrated surveillance plans for antimicrobial resistance (AMR) monitoring. Because of the theoretical potential for disinfecting chemical to co-select for AMR, biocides should be used according to manufacturers’ recommendations. -
Book (stand-alone)The performance of antimicrobial susceptibility testing programmes relevant to aquaculture and aquacultural products 2019
Also available in:
No results found.This Circular addresses best practice guidelines for the performance of these susceptibility tests. Section 1 discusses the relevance of this document to The FAO Action Plan on Antimicrobial Resistance 2016-2020. Section 2 provides a general background to the principles of antimicrobial susceptibility testing. Section 3 discusses the current status of the standard protocols that can be recommended for use in antimicrobial susceptibility testing of bacteria isolated from aquatic animals. Following a consideration of 44 species of bacteria that represent those most frequently isolated from aquatic animals, it demonstrates that the currently available standardized protocols are adequate for the determination of the antimicrobial susceptibility of 37 of them (84 percent). Section 4 discusses the importance of the design of programmes aimed at monitoring or surveillance of antimicrobial resistance associated with the use of antimicrobial agents in the rearing of aquatic animals. In this paper four designs are outlined, each of which will provide data for programmes aimed at answering different questions. Section 5 provides some conclusions, while Section 6 gives a list of references. The Circular is supported by four annexes that provide: (i) a listing of Clinical and Laboratory Standards Institute (CLSI) documents cited in the paper; (ii) a list of the antimicrobial agents most commonly used in aquaculture; (iii) notes on the selection of test protocols for selected Gram-positive cocci; and (iv) guidance on the possible use of epidemiological cut-off values in a clinical context.
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