Résistance aux antimicrobiens

Articles dans des revues scientifiques


Hibbard, R.; Mendelson, M.; Page, S. W.; Pinto Ferreira, J.; Pulcini, C.; Paul. M. C.; Faverjon, C. Antimicrobial stewardship: a definition with a One Health perspective. npj Antimicrobials & Resistance. 2024. 2:15; https://doi.org/10.1038/s44259-024-00031-w

Qiu, Y.; Ferreira, J.P.; Ullah, R.W.; Flanagan, P.; Zaheer, M.U.; Tahir, M.F.; Alam, J.; Hoet, A.E.; Song, J.; Akram, M. Assessment of the Implementation of Pakistan’s National Action Plan on Antimicrobial Resistance in the Agriculture and Food Sectors. Antibiotics 2024, 13, 206. https://doi.org/10.3390/antibiotics13030206


Chadborn, T.; Williams, S; Jorgensen, T.; Price, C.; Buckel, A.; Altieri, E. An approach for embedding behavioural science in antimicrobial resistance One Health research. Journal of Infection and Public Health, Volume 16, Supplement 1, 2023. https://doi.org/10.1016/j.jiph.2023.11.001.

Nhung, N.T., Dutta, A., Higginson, E., Kermack, L., Yen, N.T.P., Phu, D.H., Kiet, B.T. et al. 2023. Impact of antimicrobial use on abundance of antimicrobial resistance genes in chicken flocks in Vietnam. Jac-Antimicrobial Resistance, 5(4). https://doi.org/10.1093/jacamr/dlad090  

Upadhyaya, N.; Karki, S.; Rana, S.; Elsohaby, I.; Tiwari, R.; Oli, M.; Paudel, S. Trend of Antimicrobial Use in Food-Producing Animals from 2018 to 2020 in Nepal. Animals 2023, 13, 1377. https://doi.org/10.3390/ ani13081377

 Watzinger, A., Prommer, J., Spiridon, A. et al. Functional redundant soil fauna and microbial groups and processes were fairly resistant to drought in an agroecosystem. Biol Fertil Soils (2023). https://doi.org/10.1007/s00374-023-01728-2

Scott Weese, J., Da Costa Junior, G., Gonzalez-Zorn, B., Hardefeldt, L., Matheu, J., Moulin, G., . . . Valsson, O. (2022). Governance Processes and Challenges for Reservation of Antimicrobials Exclusively for Human Use and Restriction of Antimicrobial Use in Animals. Journal of Law, Medicine & Ethics, 50(S2), 55-63. https://doi.org/10.1017/jme.2022.80

Bondad-Reantaso MG, MacKinnon B, Karunasagar I, et al. Review of alternatives to antibiotic use in aquaculture. Rev Aquac. 2023;1‐31. doi:10.1111/raq.12786

Beyene AM, Andualem T., Dagnw GG., Getahun M, LeJeune J, and Ferreira JP. Situational Analysis of Antimicrobial Resistance, Laboratory Capacities, Surveillance Systems and Containment Activities in Ethiopia: A New and One Health Approach. One Health, 16:2023. https://doi.org/10.1016/j.onehlt.2023.100527 

Carrique-Mas, J.J., Hue, L.T., Dung, L.T., Thuy, N.T. & Padungtod, P. 2023. Restrictions on antimicrobial use in aquaculture and livestock, Viet Nam. Bulletin of the World Health Organization, 101(3): 223–225. https://doi.org/10.2471/BLT.22.289187

El Omeiri N, Beith A, Bruinsma N, Caipo M, Barcos L, Mesplet M, del Barrio L, Minassian M, Contreras I, Vasquez G, Corrales M, Ramón-Pardo P. Driving multisectoral antimicrobial resistance action in South America: Lessons learned from implementing and enhanced tripartite AMR country self – assessment tool. One Health, 16: 100474

Bondad-Reantaso MG, MacKinnon B, Karunasagar I, et al. Review of alternatives to antibiotic use in aquaculture. Rev Aquac. 2023;1‐31. doi:10.1111/raq.12786

Caipo M, Gatica MdlÁ, Rojas H and del Barrio L (2023) A qualitative approach for a situation analysis of AMR risks in the food animal production sector. Front. Vet. Sci. 10:1045276. doi: 10.3389/fvets.2023.1045276

Keck N, Treilles M, Gordoncillo M, Ivette OLI, Dauphin G, Dorado-Garcia A, Eckford S, Kabali E, Gourlaouen M, Latronico F, Lubroth J, Sumption K, Song J and Mouillé B (2023) A systematic approach toward progressive improvement of national antimicrobial resistance surveillance systems in food and agriculture sectors. Front. Vet. Sci. 9:1057040. https://doi.org/10.3389/fvets.2022.1057040


Muloi, D.M., Hassell, J.M., Wee, B.A. et al. Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya. BMC Med 20, 471 (2022). https://doi.org/10.1186/s12916-022-02677-7

Kiet BT, Nhung NT, Yen NTP, Phu DH, Dung NTT, Yen LK, Thu HTV, Carrique-Mas JJ. Impact of Freeze Storage on the Estimation of Phenotypic Antimicrobial Resistance Prevalence in Escherichia coli Collected from Faecal Samples from Healthy Humans and Chickens. Antibiotics (Basel). 2022 Nov 17;11(11):1643. https://doi.org/10.3390/antibiotics11111643. PMID: 36421288; PMCID: PMC9686596.

De Carolis, A.; Newmark, A.J.; Kim, J.; Cazier, J.; Hassler, E.; Pietropaoli, M.; Robinette, C.; Formato, G.; Song, J. Results of an International Survey for Risk Assessment of Honey Bee Health Concerning Varroa Management. Appl. Sci.2023, 13, 62. https://doi.org/10.3390/app13010062

Poupaud, M., Goutard, F. L., Phouthana, V., Viera, F. M., Caro, D., Patriarchi, A., & Paul, M. C. 2022. Different kettles of fish: Varying patterns of antibiotic use on pig, chicken and fish farms in Lao PDR and implications for antimicrobial resistance strategies. Transboundary and Emerging Diseases, 00, 1– 12. https://doi.org/10.1111/tbed.14766

Phu, D.H., Wongtawan, T., Truong, D.B., Van Cuong, N., Carrique-Mas, J. & Thomrongsuwannakij, T. 2022. A systematic review and meta-analysis of integrated studies on antimicrobial resistance in Vietnam, with a focus on Enterobacteriaceae, from a One Health perspective. One Health, 15: 100465. https://doi.org/10.1016/j.onehlt.2022.100465

Kiet BT, Nhung NT, Yen NTP, Phu DH, Dung NTT, Yen LK, Thu HTV, Carrique-Mas JJ. Impact of Freeze Storage on the Estimation of Phenotypic Antimicrobial Resistance Prevalence in Escherichia coli Collected from Faecal Samples from Healthy Humans and Chickens. Antibiotics. 2022; 11(11):1643. https://doi.org/10.3390/antibiotics11111643

Caputo, A., Bondad‐Reantaso, M.G., Karunasagar, I., Hao, B., Gaunt, P., Verner‐Jeffreys, D., Fridman, S. and Dorado‐Garcia, A., 2022. Antimicrobial resistance in aquaculture: A global analysis of literature and national action plans. Reviews in Aquaculture. 2022. https://doi.org/10.1111/raq.12741

Endeshaw Demil, Laekemariam Teshome, Yoseph Kerie, Almaz Habtamu,Wondwosen Kumilachew, TenawAndualem, Sefinew AlemuMekonnen (2022). Prevalence of subclinical mastitis, associated risk factors and antimicrobial susceptibility of the pathogens isolated from milk samples of dairy Cows in Northwest Ethiopia; Preventive Veterinary Medicine. Available online 26 May 2022, 105680. https://doi.org/10.1016/j.prevetmed.2022.105680

Belachew Tefera, Tamiru Tilki, Nardos Tefera, Zerihun Bayene, Sileshi Belew, Rigbe Haftu, Fediko Tolasa, Yosef Nuguse, Sinke Ararso, Daniel Getachew, Befikad Soyum, and Tenaw Andualem (2022). Antimicrobial resistance status of selected bacteria isolated from animal source foods and feed in Ethiopia; Ethiop. Vet. J., 2022, 26 (2), 18-37  https://dx.doi.org/10.4314/evj.v26i2.2

Deekshit, V. K., Maiti, B., Kumar, B. K., Kotian, A., Pinto, G., Bondad-Reantaso, M. G. & Karunasagar, I. Antimicrobial resistance in fish pathogens and alternative risk mitigation strategies. Reviews in Aquaculture: 13. https://doi-org.fao.idm.oclc.org/10.1111/raq.12715

Pinto Ferreira, J.; Battaglia, D.; Dorado García, A.; Tempelman, K.; Bullon, C.; Motriuc, N.; Caudell, M.; Cahill, S.; Song, J.; LeJeune, J. Achieving Antimicrobial Stewardship on the Global Scale: Challenges and Opportunities. Microorganisms 2022, 10, 1599. https://doi.org/10.3390/microorganisms10081599

Jauro S, Hamman MM, Malgwi KD, Musa JA, Ngoshe YB, Gulani IA, Kwoji ID, Iliya I, Abubakar MB, Fasina FO (2022) Antimicrobial resistance pattern of methicillin-resistant Staphylococcus aureus isolated from sheep and humans in Veterinary Hospital Maiduguri, Nigeria, Veterinary World, 15(4): 1141-1148. http://www.doi.org/10.14202/vetworld.2022.1141-1148

Mader R, Muñoz Madero C, Aasmäe B, Bourély C, Broens EM, Busani L, Callens B, Collineau L, Crespo-Robledo P, Damborg P, Filippitzi M-E, Fitzgerald W, Heuvelink A, van Hout J, Kaspar H, Norström M, Pedersen K, Pohjanvirta T, Pokludova L, Dal Pozzo F, Slowey R, Teixeira Justo C, Urdahl AM, Vatopoulos A, Zafeiridis C, Madec J-Y and Amat J-P (2022) Review and Analysis of National Monitoring Systems for Antimicrobial Resistance in Animal Bacterial Pathogens in Europe: A Basis for the Development of the European Antimicrobial Resistance Surveillance Network in Veterinary Medicine (EARS-Vet). Front. Microbiol. 13:838490. https://doi.org/10.3389/fmicb.2022.838490

Belachew, T.; Belachew, B.; Sileshi, B.; Ravinetto, R.; Tenaw. A.; Zerihun, A.; Ayalew, Z.; Gudeta, U.; Tadese, S.; Abdisa, H.; Dinsefa, J.; Diriba, D. and Bizuayehu B. 2022. Study on identification, assay and organoleptic quality of veterinary medicines in Ethiopia. Journal of Pharmaceutical Policy and Practice, 15:17. https://doi.org/10.1186/s40545-022-00410-6

Miller, S.A.; Ferreira, J.P.; LeJeune, J.T. 2022. Antimicrobial Use and Resistance in Plant Agriculture: A One Health Perspective. Agriculture 2022, 12, 289. https://doi.org/10.3390/agriculture12020289

Caudell, M. A., Kiambi, S., Afakye, K., Koka, E., Kabali, E., Kimani, T., & Dorado-Garcia, A. (2022). Social-technical interventions to reduce antimicrobial resistance in agriculture: Evidence from poultry Farmer Field Schools in Ghana and Kenya. JAC-Antimicrobial Resistance, 4(1), dlab193. https://doi.org/10.1093/jacamr/dlab193

Croppi, S., Yu, L. N., Robinette, C. S., Hassler, E. E., Newmark, A. J., Scott, A., Cazier, J., Song, J. X. & Formato, G. 2021. Impact of Legislation on Antibiotic Use and Awareness of Beekeepers. Journal of Apicultural Science, 65(2) 265-277. 10.2478/jas-2021-0022. https://doi.org/10.2478/jas-2021-0022

Ha, L. T. T., Rueanghiran, C., Giang, N. T. H., Thuy, D. P., Phu, D. H., Kiet, B. T., Hien, V. B. et al. 2021. Antimicrobial Usage Surveillance Through Sales at Veterinary Drug Shops Intended for Livestock in Vietnam. Frontiers in Sustainable Food Systems, 5: 11. 10.3389/fsufs.2021.784500. https://doi.org/10.3389/fsufs.2021.784500  

Inthavong, P., Chanthavong, S., Nammanininh, P., Phommachanh, P., Theppangna, W., Agunos, A., Wagenaar, J.A. et al. 2022. Antimicrobial Resistance Surveillance of Pigs and Chickens in the Lao People’s Democratic Republic, 2018–2021. Antibiotics, 11(2). https://doi.org/10.3390/antibiotics11020177

Caudell M, Mangesho PE, Mwakapeje ER, Dorado-García A, Kabali E, Price C, OleNeselle M, Kimani T, Fasina FO. Narratives of veterinary drug use in northern Tanzania and consequences for drug stewardship strategies in low-income and middle-income countries. BMJ Global Health 2022;7:e006958. https://doi.org/10.1136/bmjgh-2021-006958 

Mader, R., Bourély, C., Amat, J.-P., Broens, E.M., Busani, L., Callens, B. et al. 2022. Defining the scope of the European Antimicrobial Resistance Surveillance network in Veterinary medicine (EARS-Vet): a bottom-up and One Health approach. Journal of Antimicrobial Chemotherapy: dkab462. https://doi.org/10.1093/jac/dkab462


Nguyen Van Cuong, Nguyen Phuong Cam Ly, Nguyen Thi Bich Van, Doan Hoang Phu, Bach Tuan Kiet, Vo Be Hien, Pawin Padungtod, Guy Thwaites, Marc Choisy, Juan Carrique-Mas, Feasibility study of a field survey to measure antimicrobial usage in humans and animals in the Mekong Delta region of Vietnam, JAC-Antimicrobial Resistance, Volume 3, Issue 3, September 2021, dlab107, https://doi.org/10.1093/jacamr/dlab107

Luu QH, Nguyen TLA, Pham TN, Vo NG, Padungtod P. Antimicrobial use in household, semi-industrialized, and industrialized pig and poultry farms in Viet Nam. Prev Vet Med. 2021;189:105292. https://doi.org/10.1016/j.prevetmed.2021.105292

Tuat CV, Hue PT, Loan NTP, Thuy NT, Hue LT, Giang VN, Erickson VI and Padungtod P. 2021. Antimicrobial Resistance Pilot Surveillance of Pigs and Chickens in Vietnam, 2017–2019. Front. Vet. Sci. 8:618497. doi: 10.3389/fvets.2021.618497 

Luu Quynh Huong, Nguyen Thi Bich Thuy, Nguyen Thi Lan Anhy, Do Thi Thu Thuy, Dao Thi Ha Thanh, PawinPadungtod. Antibiotics use in fish and shrimp farms in Vietnam. Aquaculture Reports Volume 20, July 2021. https://doi.org/10.1016/j.aqrep.2021.100711

Marianne Sandberg, Ayla Hesp, Cécile Aenishaenslin, Marion Bordier, Houda Bennani, Ursula Bergwerff, Ilias Chantziaras, Daniele De Meneghi, Johanne Ellis-Iversen, Maria-Eleni Filippizi, Koen Mintiens, Liza R. Nielsen, Madelaine Norström, Laura Tomassone, Gerdien van Schaik and Lis Alban. Assessment of Evaluation Tools for Integrated Surveillance of Antimicrobial Use and Resistance Based on Selected Case Studies. Front. Vet. Sci., 08 July 2021.

Tuat, C.V., Hue, P.T., Loan, N.T.P., Thuy, N.T., Hue, L.T., Giang, V.N., Erickson, V.I., Padungtod, P. 2021. Antimicrobial Resistance Pilot Surveillance of Pigs and Chickens in Vietnam, 2017–2019. Frontiers in Veterinary Science, 8: 467. 

Poupaud, M., Putthana, V., Patriarchi, A., Caro, D., Agunos, A., Tansakul, N., & Goutard, F. L. (2021). Understanding the veterinary antibiotics supply chain to address antimicrobial resistance in Lao PDR: roles and interactions of involved stakeholdersActa Tropica, 105943.

Luu Quynh H, Nguyen Thi Bich T, Ta Hoang L, Erickson VI, Padungtod P. (2021). Quality testing of veterinary antimicrobial products used for livestock in Vietnam, 2018–2019. PLoS ONE 16(3): e0247337. https://doi.org/10.1371/journal.pone.0247337

Mangesho, P. M., Caudell, M. A., Mwakapeje, E., OleNesselle, M., Kimani, T., Dorado-García, A., Kabali, E. & Fasina, F. O. (2021). Knowing Is Not Enough: A Mixed-Methods Study of Antimicrobial Resistance Knowledge, Attitudes, and Practises Among Maasai PastoralistsFrontiers in Veterinary Science, 8, 152. 

Peter E. Mangesho; Mark A. Caudell; Elibariki R. Mwakapeje; Moses Ole-Neselle; Emmanuel Kabali; Mark Obonyo; Alejandro Dorado-Garcia; Antonio Valcarce; Tabitha Kimani; Cortney Price;  Suzanne Eckford; Folorunso O. Fasina.  “We are doctors”: Drivers of animal health practices among Maasai pastoralists and implications for antimicrobial use and antimicrobial resistancePreventive Veterinary Medicine, 2021, p. 105266.

Kiambi, S.; Mwanza, R.; Sirma, A.; Czerniak, C.; Kimani, T.; Kabali, E.; Dorado-Garcia, A.; Eckford, S.; Price, C.; Gikonyo, S.; et al. Understanding Antimicrobial use Contexts in the Poultry Sector: Challenges for Small-Scale Layer Farms in KenyaAntibiotics 2021, 10, 106.


Mader Rodolphe, Damborg Peter, Amat Jean-Philippe, Bengtsson Björn, Bourély Clémence, Broens Els M, Busani Luca, Crespo-Robledo Paloma, Filippitzi Maria-Eleni, Fitzgerald William, Kaspar Heike, Madero Cristina Muñoz, Norström Madelaine, Nykäsenoja Suvi, Pedersen Karl, Pokludova Lucie, Urdahl Anne Margrete, Vatopoulos Alkiviadis, Zafeiridis Christos, Madec Jean-Yves, on behalf of EU-JAMRAI. Building the European Antimicrobial Resistance Surveillance network in veterinary medicine (EARS-Vet). Euro Surveill. 2021;26(4):pii=2001359. 

Tiseo, K.; Huber, L.; Gilbert, M.; Robinson, T.P.; Van Boeckel, T.P. Global Trends in Antimicrobial Use in Food Animals from 2017 to 2030Antibiotics 20209, 918.

Penarubia, O.R., Toppe, J., James, D., 2020. Fish water management: turning waste into healthy feed with antimicrobial properties. Asian Fisheries Science 33.S1 (2020): 11-15

Bondad-Reantaso, M.G., Lavilla-Pitogo, C., Lopez, M.L., Hao, B. 2020. Guidance in Development of Aquaculture Component of a National Action Plan on Antimicrobial ResistanceAsian Fisheries Science 33.S1 (2020):119–124 

Karunasagar, I., Karunasagar, I., Bondad-Reantaso, M.G. 2020. Complexities Involved in Source Attribution of Antimicrobial Resistance Genes Found in Aquaculture Products. Asian Fisheries Science 33.S1 (2020):16–21. 

Orsolya Mikecz, Ugo Pica-Ciamarra, Ana Felis, Gerald Nizeyimana, Patrick Okello and Chiara Brunelli. 2020. Data on antimicrobial use in livestock: Lessons from UgandaOne Health Volume 10.

Luu Quynh Huong, Tran Thi Thu Hang, Pham Thi Ngoc, Chu Van Tuat, Vera Irene Erickson and Pawin Padungtod. 2020. Pilot Monitoring of Antimicrobial Residues in Chicken and Porkin VietnamJournal of Food Protection Volume: 83 Issue: 10 Pages: 1701-1706 DOI: 10.4315/JFP-20-111

Kofi Afakye, Stella Kiambi, Eric Koka, Emmanuel Kabali, Alejandro Dorado-Garcia, Ann Amoah, Tabitha Kimani, Benjamin Adjei and Mark A Caudell. The Impacts of Animal Health Service Providers on Antimicrobial Use Attitudes and Practices: An Examination of Poultry Layer Farmers in Ghana and Kenya. Antibiotics 2020, 9(9), 554

Barroga, T.R.M., Morales, R.G., Benigno, C.C., Castro, S.J.M., Caniban, M.M., Cabullo, M.F.B., Agunos, A., de Balogh, K. & Dorado-Garcia, A. 2020. Antimicrobials Used in Backyard and Commercial Poultry and Swine Farms in the Philippines: A Qualitative Pilot Study. Frontiers in Veterinary Science, 7:329.

Coyne, L.; Benigno, C.; Giang, V.N.; Huong, L.Q.; Kalprividh, W.; Padungtod, P.; Patrick, I.; Ngoc, P.T.; Rushton, J. Exploring the Socioeconomic Importance of Antimicrobial Use in the Small-Scale Pig Sector in VietnamAntibiotics 2020, 9, 299. 

Caudell MA, Dorado-Garcia A, Eckford S, Creese C, Byarugaba DK, Afakye K, et al. (2020) Towards a bottom-up understanding of antimicrobial use and resistance on the farm: A knowledge, attitudes, and practices survey across livestock systems in five African countries. PLoS ONE 15(1): e0220274.


Zeru H, Gemechu A, Andualem Tenaw, Seid H and Mengesha F. (2019) Awareness of veterinary drug retail outlets on antimicrobial resistance and its containment strategy in Ethiopia; Pharmacovigil and Pharmacoepi (2019) 2: 9-13. https://doi.org/10.33805/2638-8235.111

Pham-Duc P, Cook MA, Cong-Hong H, Nguyen-Thuy H, Padungtod P, et al. 2019. Knowledge, attitudes and practices of livestock and aquaculture producers regarding antimicrobial use and resistance in Vietnam. PLOS ONE 14(9): e0223115. 

T. Kimani, S. Kiambi, S. Eckford, J. Njuguna, Y. Makonnen, G. Rugalema, S.P. Morzaria, J. Lubroth, F.O. Fasina. Expanding beyond zoonoses: the benefits of a national One Health coordination mechanism to address antimicrobial resistance and other shared health threats at the human-animal-environment interface in Kenya. Rev Sci Tech. 2019 May;38(1):155-171.